Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915985.1_cds_XP_016465676.1_58608
CDS Infomation

[gene=LOC107788515] [db_xref=GeneID:107788515] [protein=rop guanine nucleotide exchange factor 14-like] [protein_id=XP_016465676.1] [location=join(2720..2795,14811..15182,16095..16249,16333..16407,16504..16755,17000..17347,17790..17969)] [gbkey=CDS]
Sequence

ATGGTGATCATGAGACAGACATTAGCCTGCTGCACGAGAAACAGAGAGTTTAGCATTGAC
TTTACTGAACAAGAGAGAATTACAACATATGATGGCCTCGAGAGCTGCATACGGAACTGT
CAGTCCTATGACAATGAAAGCGCGACTAGTAGAGGTGATGGGGGTGTTACAGATTCCTTA
AATGATGATGACTCAAGCAGCTCTTCCAGCAACAATGCTTTTGAATCATTCTCCTCTCAA
TGGACAACGAGGAAGAGCGACGATCAGGGATCGTATGACAATGGGAATTTCTATGTGAAA
GACAAACCTGCTTACACAACCCAATTTTCAGATGTGGAGACAATGAAAGACAAATTTGCA
AAATTGCTGCTTGGTGAGGATGTGACGGGAGGAAGCAAGGGAGTTTCGACTGCATTAGCA
TTGTCCAATGCCATTACAAATCTTGCAGCATCTGTGTTTGGAGAGCTGTGGAAATTGGAG
CCACTTGCAGAGGAAAGGAAGAGGAAATGGCAAAGGGAAATGGATTGGCTGCTCTCACCT
ACCAAACATATGATTGAGTTGGTTCCTACAAAACAAAATGGTTCTAATGGCCAGAGATTG
GAGATAATGACACCAAAAGCTCGTGCAGACATCCATATAAATCTTCCAGCACTTCAGAAA
TTGGATTCCATGCTTCTTGGAATGCTGGATTCAATGGTTAATACTGAGTTTTGGTATACG
GAAGTGAGTAGCCGAGCAGAAGAAAAGGGCACAAGGTGGTGCCTTCCTTCACCCAAGGTA
CCCATCTCTGGGCTCTCTGACACTGAAATAAAGAAATTGCTGAATCAGGGAAAGTTGGCC
GGTCAAATATTCAAGGCAGCAAAAGCTATTAATGAAAACATCTTAGCTGAAATGCCGGTT
CCAAAAGTTATCAAGGATGCACTTCCAAAGTCTGGCAGAGAAAGCCTCGGCGAGGACCTT
TATAGAATCCTGACTGCAGAATCAACCTCTGCTGAGGAAATGTTCAATTCCTTGAACTTG
AGATCTGAAAACAGTGCACTTGAATCTGTTAACAGGTTAGAAGGAGCAATTCTTGCATGG
AAAGAAAGAATAACTGATCAAGCTAGTGGAAAGTCTCCAGTTCGAAGATCTTGGTCTTTA
GTAAAAGATCCTATATCTGAGCTAGACAAATTGGAGGTCTTATTGAGCCAAGCAGAAGCT
CTTCTGCAGCAGCTCAAAATTAAATATCCTAACCTTCCTCAGACATTCCTCAATGTCACA
AAAATCCAGTATTGCACGGACATTGGGCATTTAATTCTGGAAGCATACTCTCGGGTTCTC
TTAAACTTAGCGTACAGCATTCTGATCAGGATAGGAGAAGTTTTGCAAGTAGATATCTCG
AGCAACCCCAATTCACCAGCAGCTGCTGACTACTTTCCTGGTACAAGAATCCCTGGATTA
TTAGAGTCCTATAGCTAG

Peptide Sequence

PEP ID

XP_016465676.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 14-like [Nicotiana tabacum]
Sequence

MVIMRQTLACCTRNREFSIDFTEQERITTYDGLESCIRNCQSYDNESATSRGDGGVTDSL
NDDDSSSSSSNNAFESFSSQWTTRKSDDQGSYDNGNFYVKDKPAYTTQFSDVETMKDKFA
KLLLGEDVTGGSKGVSTALALSNAITNLAASVFGELWKLEPLAEERKRKWQREMDWLLSP
TKHMIELVPTKQNGSNGQRLEIMTPKARADIHINLPALQKLDSMLLGMLDSMVNTEFWYT
EVSSRAEEKGTRWCLPSPKVPISGLSDTEIKKLLNQGKLAGQIFKAAKAINENILAEMPV
PKVIKDALPKSGRESLGEDLYRILTAESTSAEEMFNSLNLRSENSALESVNRLEGAILAW
KERITDQASGKSPVRRSWSLVKDPISELDKLEVLLSQAEALLQQLKIKYPNLPQTFLNVT
KIQYCTDIGHLILEAYSRVLLNLAYSILIRIGEVLQVDISSNPNSPAAADYFPGTRIPGL
LESYS

Transcript Sequence

Gene sequence data has not been registered.